Download
- Current version is CellDesigner4.3 (released Feb 1, 2013)
Ver.4.3 updates libSedML + libSBGN-ML + SABIO-RK reaction information import function update + bug fixes.
 CellDesigner 4.3 |
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For Mac OSX 10.9 (Marvericks) Users (2014/06/11) NEW
Please follow the instruction to install CellDesigner:http://celldesigner.org/~funa/Mavericks/
For 64bit Windows Users
CellDesigner support 32 bit only. Please install CellDesigner onto 32 bit mode.
For 64bit Linux Users (2013/06/14)
Linux 64bit version of CellDesigner now supports CentOS 6.3 and Ubuntu 10.04.
Thanks to Nicolas Rodriguez and Vinh Tran.
Features
System Requirements
The current version of CellDesigner requires Java2 Runtime Environment (JRE1.6.0 or later).
The installer includes JRE (Java Runtime Environment Version 1.6), so you do not have to install Java before your installation.
- Windows (XP or later) 32bit only*
- MacOSX (10.6 or later) 32 bit, 64bit
- Linux with X Window System ( Fedora Core 4 or later) 32bit, 64bit **
*On Windows Vista and 7, the installer is for 32 bit version. Please install CellDesigner onto 32bit mode.
**On Linux platform, there are two separate installers for 32 bit and 64 bit versions.
**On Linux platform, due to the version of native libraries, Fedora Core 4 or later is recommended; some problems will arise if you use other than these.
- If SBW and its modules have already been installed, these modules are available. Especially time evolving simulation of the model being edited can be performed.
- If you want to use Copasi (http://www.copasi.org) as an alternative solver on Windows, please download "Visual Studio 2010 runtime (Visual C++ 2010 runtime)" to use Copasi from CellDesigner.
Install
For Mac OSX 10.9 (Marvericks) Users (2014/06/11) NEW
Please follow the instruction to install CellDesigner: http://celldesigner.org/~funa/Mavericks/
1. Install SBW and SBW modules
If you are interested in time evolving simulation and analysis on biochemical networks, we recommend you to install the Systems Biology Workbench (SBW) and SBW-powered software before you install CellDesigner.
To install SBW and SBW-powered software, follow their installation instructions.
If you would like to use CellDesigner alone right now, you can postpone this step until you need simulation and/or analysis.
- (*) As of Feb 2012, SBW 2.9.0 is available for Windows, MacOSX and Linux. For details on SBW information: http://sbw.sourceforge.net/
- (**) Note: In case you have installed SBW 2.7.6 or later, and you encounter an error while installing CellDesigner, there might be a possibility that the C++ Broker is up which prevents CellDesigner to start. Please try to kill the broker using the Task Manager, or restart your system before you resume the CellDesigner installation.
2. Install CellDesigner
Download the one for your operating system and follow instructions provided in 00READEME.txt or Startup Guide to install CellDesigner for each environment.
The current release is distributed in archived installer package for each operating system.
- Windows: CellDesigner-4.3-windows-installer.exe
- MacOSX: CellDesigner-4.3-osx-installer.dmg
- Linux: CellDesigner-4.3-linux-installer.run
* While J2RE is required for CellDesigner to run, the installers include it. Therefore, you do not need to download or install J2RE.
Documentation
- CellDesigner 4.3 : Startup Guide [PDF Version]
- CellDesigner 4.3 : Running CellDesigner's Simulation using Control Panel [PDF Version]
- CellDesigner 4.3 : Plugin Tutorial [PDF Version]
- CellDesigner Plungin API help (in your installed directory, /document/plugin/index.html)
- Help
