CellDesigner Help

Graphical Notation of Gene/RNA/Antisense RNA

GeneRNAAntisense RNA

Promoter Structure Representation

CellDesigner allows users to define the structure of promoter regions. Specific promoter regions are represented on upper part of the box. When such structure information is defined, lines for both sides and lower part of the box are either not shown or dimmed to highlight structures represented on the upper line.

Symbols related to transcription and translation

Gene with regions RNA with regions Antisense RNA with regions

An example of transcription related symbols

Transcription example Transcription example

Alternative Splicing

Alternative splicing can be represented as transition of an RNA in the original state to multiple RNAs with different splicing patterns.

RNA alternative splicing
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