CellDesigner Help

Install CellDesigner

The current release is distributed in archived installer package for each operating system.

While J2RE is required for CellDesigner to run, the installers for Windows and Linux include it, and MacOSX has a Java runtime environment initially. Therefore, you do not need to download or install J2RE. (If you installed SBW, you have already had it anyway.) Download the one for your operating system and follow instructions below to install CellDesigner for each environment.

Windows:

•  Double click CDInstall_2_0_win.exe.

MacOSX:

•  Double click CDInstall_2_0_mac.zip.
•  The compressed installer should be recognized by Stuffit Expander and should automatically be expanded to CDInstall_2_0 . Then double click it.

Linux:

•  Open a shell and, cd to the directory where you downloaded the installer.
•  At the prompt type: sh ./CDInstall_2_0_linux.bin.

After then, an installer window should open, and follow the message therein.

If you have installed SBW, set the path to the SBW library.

After installation finished, you would see the following directories/files in the installation directory ( CellDesigner by default).

+00README.txt
|
+CellDesigner2.0 executable application module
|
+documents/
| +startup_guide2.pdf this document
|
+exec/
| +block.jar library for block diagram editor
| +celldesigner.jar library for CellDesigner application
| +xercesImpl.jar XML library by the Apache Software Foundation
| +xml-apis.jar XML-API library by the Apache Software Foundation
|
+licenses/
| +xerces/
| +LICENCE
| +LICENCE-DOM.html
| +LICENCE-SAX.html
|
+samples/
+components.xml sample for various components
+M-Phase.xml sample for model editing
+simulation.xml sample for simulation
+test-level1.xml sample for SBML level 1 document
+test-level2.xml sample for SBML level 2 document

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